Information for 18-GGGGCGAAAGCAC (Motif 19)

A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A G T C A T G C A G T C
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 16.7bp
Average Position of motif in Background54.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGGGCGAAAGCAC
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGGCGAAAGCAC
-GGGGGAATCCCC
 A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGGGCGAAAGCAC
NNNAAGGGGGCGGGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGGGCGAAAGCAC
--TGCGCAGGCGC
 A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGAAAGCAC
TGGCGGGAAAHB--
 A C G T A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGAAAGCAC
TTCGCGCGAAAA---
 A C G T A C G T A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGGCGAAAGCAC
-GGGCGGGACC--
 A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGGCGAAAGCAC----
AAGGCGAAATCATCGCA
 A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGGGCGAAAGCAC--
---GCGCATGCGCAC
 A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGGGCGAAAGCAC--
---GCGCATGCGCAG
 A C T G A T C G A C T G A C T G A G T C A C T G C G T A C G T A C T G A A C T G A G T C G T C A A G T C A C G T A C G T
A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G