Information for 4-CACWSWGKKWCAGGGK (Motif 9)

A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
T G A C A G T C A G T C A G T C A C G T A C T G C G T A G T C A G T C A A G T C C G T A A T C G C G A T A C T G A C G T A T C G
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 10.9bp
Average Position of motif in Background57.5 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CACWSWGKKWCAGGGK---
-------TGTCAGGGGGCG
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACWSWGKKWCAGGGK
GHWACAWTGTWDCWA---
 A C G T A C G T A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACWSWGKKWCAGGGK
GHTACAWTGTADCHR---
 A C G T A C G T A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CACWSWGKKWCAGGGK--
------AGGTCAAGGTCA
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CACWSWGKKWCAGGGK--
------AGGTCAAGGTCA
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CACWSWGKKWCAGGGK
--------CACAGN--
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CACWSWGKKWCAGGGK
---TGAGTGACAGSC-
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CACWSWGKKWCAGGGK
----GTGGGGGAGGGG
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CACWSWGKKWCAGGGK
--NTGATTGACAGN--
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:CACWSWGKKWCAGGGK--
--------NNCAGGTGNN
 A T G C C G T A A G T C C G T A A T G C G C A T A C T G A C G T A C G T G C A T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G