Information for 9-YRGGGCTGGCTGT (Motif 9)

A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
Reverse Opposite:
C G T A G T A C C G T A A C T G A G T C A G T C C T G A C A T G A G T C A G T C A G T C A G C T C T G A
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.848
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.0 +/- 19.5bp
Average Position of motif in Background51.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YRGGGCTGGCTGT----
--GGNGCGNCTGTTNNN
 A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YRGGGCTGGCTGT
GTCATGCHTGRCTGS
 A C G T A C G T A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----YRGGGCTGGCTGT
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--YRGGGCTGGCTGT-
NATNGGGNGGGGANAN
 A C G T A C G T A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---YRGGGCTGGCTGT
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:forward strand
Alignment:YRGGGCTGGCTGT-
--------GCTGTG
 A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:YRGGGCTGGCTGT
-------NGCTN-
 A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:YRGGGCTGGCTGT
TGGGTGTGGC---
 A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---YRGGGCTGGCTGT
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:YRGGGCTGGCTGT
---GGCGCGCT--
 A G C T C T G A A C T G A C T G A C T G G T A C A G C T A C T G A C T G G T A C A C G T A C T G C G A T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T