Information for 14-CTKTGTWTKCCAS (Motif 17)

A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A C T G G T A C C T G A C G T A C T G A A G T C C G T A G T C A C G T A A C T G
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.5 +/- 26.7bp
Average Position of motif in Background30.6 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTKTGTWTKCCAS
CCTTTGTTTT----
 A C G T A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTKTGTWTKCCAS
CTTTGT-------
 A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTKTGTWTKCCAS--
CTTTGTTTACTTTTN
 A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTKTGTWTKCCAS
-----TTTTCCA-
 A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTKTGTWTKCCAS
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTKTGTWTKCCAS-
CCATTGTATGCAAAT
 A C G T A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CTKTGTWTKCCAS
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTKTGTWTKCCAS
CCWTTGTYYB----
 A C G T A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTKTGTWTKCCAS
YCTTTGTTCC----
 A C G T A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTKTGTWTKCCAS
CCATTGTTTT----
 A C G T A G T C A C G T A C G T A C G T A C T G A G C T C G A T A G C T A C T G A G T C A G T C C G T A A T C G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T