Information for 10-AGAAGYTAAATAT (Motif 10)

C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T
Reverse Opposite:
T C G A C A G T T G C A G C A T A C G T C G A T G T C A C T A G T G A C C G A T C G A T T G A C C G A T
p-value:1e-10
log p-value:-2.390e+01
Information Content per bp:1.717
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif46.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets48.6 +/- 24.3bp
Average Position of motif in Background47.7 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0154.1_Prrx1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAAGYTAAATAT----
ANNAGTTAATTAGTTAN
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0023.1_Dlx4/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGAAGYTAAATAT-----
-GTCGGTAATTATNGNGN
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0022.1_Dlx3/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGAAGYTAAATAT-----
-NNNGGTAATTATNGNGN
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0052.1_Hoxa5/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAAGYTAAATAT-----
--ACGGTAATTAGCTCAG
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G

PH0143.1_Pou2f1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAAGYTAAATAT-----
--TACTTAATTAATNNAN
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAAGYTAAATAT
-TAATTTAATTA-
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T
A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAAGYTAAATAT
-TAATTTAATTA-
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T
A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAAGYTAAATAT-----
--AAGGTAATTACCTAAT
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

Phox2b/MA0681.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAAGYTAAATAT
-TAATTTAATTA-
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T
A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T

VAX1/MA0722.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGAAGYTAAATAT
-----CTAATTAC
 C G T A A C T G C G T A C G T A A C T G G A T C C A G T C G T A C G T A C G T A A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C