Information for 6-ACAGTCTTGTAAG (Motif 8)

C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
Reverse Opposite:
G T A C G C A T A C G T C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C G T
p-value:1e-10
log p-value:-2.532e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.2 +/- 21.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACAGTCTTGTAAG
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAGTCTTGTAAG-
ACATTCATGACACG
 C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACAGTCTTGTAAG
ATGGAAAGTCGTAAAA-
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACAGTCTTGTAAG
---RTTATGYAAB
 C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACAGTCTTGTAAG
--NATGTTGCAA-
 C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACAGTCTTGTAAG
-CTGTCTGG----
 C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTCTTGTAAG
CACAGN--------
 A C G T C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACAGTCTTGTAAG--
TAAAGTCGTAAAATAG
 A C G T C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACAGTCTTGTAAG--
TAAAGTCGTAAAACAT
 A C G T C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ACAGTCTTGTAAG
TCAGTCTT-----
 C G T A A G T C C G T A A C T G A C G T A G T C C G A T A C G T A C T G C G A T C G T A C G T A A C T G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T