Information for 15-CRTMSYWARK (Motif 20)

A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G
Reverse Opposite:
T G A C G A T C C G A T C G A T T C G A T A G C A C T G T G C A G A T C C T A G
p-value:1e-1
log p-value:-3.393e+00
Information Content per bp:1.648
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background46.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD11/MA0908.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CRTMSYWARK-
-GTCGTAAAAA
 A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CRTMSYWARK-
-GTCGTAAAAT
 A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CRTMSYWARK----
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CRTMSYWARK--
TACCATAGCAACGGT
 A C G T A C G T A C G T A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CRTMSYWARK--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CRTMSYWARK-
GGTCGTAAAAT
 A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CRTMSYWARK----
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CRTMSYWARK--
GGTCGTAAAATT
 A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CRTMSYWARK---
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CRTMSYWARK----
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A G T C C T A G A C G T T G A C A T C G A G C T G C A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T