Information for 15-CCACGCCGCTGAG (Motif 25)

A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
Reverse Opposite:
A G T C G A C T A T G C T C G A A T C G A G T C C T A G T A C G A G T C A T C G A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.781e+01
Information Content per bp:1.793
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif45.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.6 +/- 24.6bp
Average Position of motif in Background51.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCGCTGAG
GACCCCCCGCTGTG
 A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCGCTGAG-
GACCCCCCGCTGCGC
 A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACGCCGCTGAG
TCGACCCCGCCCCTAT-
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T

SP3/MA0746.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCGCTGAG
GCCACGCCCCC---
 A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACGCCGCTGAG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

KLF16/MA0741.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCGCTGAG
GCCACGCCCCC---
 A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCACGCCGCTGAG
-CCCCCTGCTGTG
 A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCGCTGAG-
GACCCCCCGCTGTGC
 A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCACGCCGCTGAG
GGCCCCGCCCCC---
 A C G T A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCGCTGAG-
GGCCYCCTGCTGDGH
 A C G T A G T C A G T C G T C A A T G C A C T G A T G C A G T C A C T G A T G C A C G T A T C G C T G A C T A G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C