Information for 2-NGGGGAGRCAGCAGGG (Motif 6)

C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
Reverse Opposite:
A T G C A T G C A G T C A G C T A C T G T A G C A C G T A T C G A G T C G A T C A C G T A G T C A G T C A T G C G T A C G A T C
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.699
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif87.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets58.6 +/- 24.3bp
Average Position of motif in Background53.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:NGGGGAGRCAGCAGGG
TGGGGA----------
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:NGGGGAGRCAGCAGGG
GGGGGAATCCCC----
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:NGGGGAGRCAGCAGGG
AGGGGAATCCCCT---
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:NGGGGAGRCAGCAGGG
AGGGGAATCCCCT---
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:NGGGGAGRCAGCAGGG
--AGGAAACAGCTG--
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:NGGGGAGRCAGCAGGG
-AGAGRRACAGCWGAC
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:NGGGGAGRCAGCAGGG--
------CACAGCAGGGGG
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----NGGGGAGRCAGCAGGG
NNTNAGGGGCGGNNNN----
 A C G T A C G T A C G T A C G T C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:NGGGGAGRCAGCAGGG
TGGGGAAGGGCM----
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:NGGGGAGRCAGCAGGG----
-----DCHCAGCAGGRGGCC
 C T A G A C T G T A C G C T A G C T A G C G T A C T A G T C A G A T G C G T C A A T C G T A G C T C G A A C T G A T C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C