Information for 9-CCTGCACGTG (Motif 11)

T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G
Reverse Opposite:
T G A C C T G A A T G C T A C G A C G T A C T G A T G C C T G A C T A G A T C G
p-value:1e-10
log p-value:-2.323e+01
Information Content per bp:1.725
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif563.3
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets53.3 +/- 25.2bp
Average Position of motif in Background47.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Id2/MA0617.1/Jaspar

Match Rank:1
Score:0.80
Offset:3
Orientation:forward strand
Alignment:CCTGCACGTG-
---GCACGTGA
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T
A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

Mlxip/MA0622.1/Jaspar

Match Rank:2
Score:0.79
Offset:3
Orientation:forward strand
Alignment:CCTGCACGTG-
---GCACGTGT
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:CCTGCACGTG
----CACGTG
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

Npas2/MA0626.1/Jaspar

Match Rank:4
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CCTGCACGTG--
--GGCACGTGTC
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

MNT/MA0825.1/Jaspar

Match Rank:5
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CCTGCACGTG--
--NGCACGTGNT
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.79
Offset:3
Orientation:forward strand
Alignment:CCTGCACGTG---
---KCACGTGMCN
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CCTGCACGTG
--NVCACGTG
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G
A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CCTGCACGTG-
---GCACGTNC
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CCTGCACGTG---
---CCACGTGGNN
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:CCTGCACGTG--
----CACGTGNC
 T A G C A G T C G A C T A T C G A G T C G T C A A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C