Information for 23-AGCTCGTAAT (Motif 38)

C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T
Reverse Opposite:
C T G A A C G T A C G T C G T A T A G C C A T G C G T A C T A G A G T C A C G T
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.805
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.6 +/- 25.9bp
Average Position of motif in Background58.9 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGCTCGTAAT----
AAACCTCGTAAAATTT
 A C G T A C G T C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGCTCGTAAT--
-GCTCGTAAAAA
 C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGCTCGTAAT----
AAAGCTCGTAAAATTT
 A C G T A C G T C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCTCGTAAT----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCTCGTAAT----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

BSX/MA0876.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AGCTCGTAAT---
-----NTAATTGG
 C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

Hoxd8/MA0910.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCGTAAT------
NAGCCATTAATTANTTA
 A C G T C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCGTAAT------
NAGCCATTAATTANTTA
 A C G T C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGCTCGTAAT---
-----NTAATTGN
 C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGCTCGTAAT----
----NNTAATTANN
 C G T A A C T G A G T C C G A T G A T C A T C G A C G T G T C A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T