Information for 19-GAAASAAGCCACM (Motif 30)

C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C
Reverse Opposite:
A C T G A C T G C G A T A C T G A T C G A T G C A C G T A C G T T A C G C G A T A C G T A G C T A G T C
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.733
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets69.5 +/- 20.0bp
Average Position of motif in Background86.6 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GAAASAAGCCACM
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAAASAAGCCACM
---AAAAGTCAA-
 C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAAASAAGCCACM
ATGTAAACADGS----
 A C G T A C G T A C G T C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAAASAAGCCACM--
-----AAACCACANN
 C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAASAAGCCACM
GTAAACAAT-----
 A C G T C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAASAAGCCACM-
TGACANARRCCAGRC
 A C G T C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAAASAAGCCACM--
GGGRAARRGRMCAGMTG
 A C G T A C G T C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAAASAAGCCACM---
-----AAACCACAGAN
 C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAAASAAGCCACM
-----CAGCC---
 C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GAAASAAGCCACM
ATATCAAAACAAAACA--
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A C G T A A T G C G T C A C G T A A T C G A T G C G T A C C G T A T G A C T G A C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T