Information for 16-AAGAGYWAACTCT (Motif 26)

C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
Reverse Opposite:
G C T A A C T G C T G A A C T G A C G T C G A T C G A T T C G A A T G C A C G T A G T C A C G T A G C T
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.828
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.4 +/- 25.3bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAGAGYWAACTCT-
AAAGATCAAAGGGTT
 A C G T C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AAGAGYWAACTCT
AAAGATCAAAGG--
 A C G T C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AAGAGYWAACTCT
-AAAGTAAACA--
 C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AAGAGYWAACTCT
-AAAGTAAACA--
 C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:AAGAGYWAACTCT
--GCTGTTACCCT
 C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGYWAACTCT---
GANNATTAATCCCTNNN
 A C G T C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGYWAACTCT
GAAAMTGAAACT--
 A C G T C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AAGAGYWAACTCT
GAGAACCGAAACTG-
 A C G T A C G T C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGYWAACTCT--
NNNNCTGTTAACNNTNN
 A C G T A C G T C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AAGAGYWAACTCT
-WAAGTAAAYA--
 C T G A C G T A A C T G C G T A A T C G A G C T G C T A C G T A T C G A A G T C A G C T A G T C C A G T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T