Information for 13-GTCKTTAAAT (Motif 24)

A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T
Reverse Opposite:
C G T A A C G T A C G T G A C T C G T A C G T A T G C A T A C G C T G A G T A C
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.717
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.8 +/- 25.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GTCKTTAAAT-
--ATTTGAATT
 A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GTCKTTAAAT
----TTTAAT
 A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTCKTTAAAT---
---TTTGAAACCG
 A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCKTTAAAT
GTCGTAAAAT
 A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTCKTTAAAT
GGTCGTAAAAT
 A C G T A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTCKTTAAAT---
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCKTTAAAT-
GGTCGTAAAATT
 A C G T A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCKTTAAAT
GTCGTAAAAA
 A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCKTTAAAT
GGTCGTAAAAA
 A C G T A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTCKTTAAAT---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C T G G A C T A T G C A C G T A C G T A C G T C T G A G T C A G T C A C G A T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T