Information for 2-CCKCCCCCCAGCCGCG (Motif 18)

A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
Reverse Opposite:
A T G C C T A G T G A C C T A G A T C G A G T C G C A T A C T G T A C G A C T G T A C G A C T G A C T G T G A C C T A G A C T G
p-value:1e-12
log p-value:-2.857e+01
Information Content per bp:1.724
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets43.0 +/- 27.1bp
Average Position of motif in Background53.5 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCKCCCCCCAGCCGCG-
--GACCCCCCGCTGCGC
 A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G A C G T
A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0097.1_Zfp281_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCKCCCCCCAGCCGCG
TCCCCCCCCCCCCCC----
 A C G T A C G T A C G T A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCKCCCCCCAGCCGCG
--GACCCCCCGCTGTG
 A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCKCCCCCCAGCCGCG
------CGCAGCTGCG
 A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCKCCCCCCAGCCGCG-
--GACCCCCCGCTGTGC
 A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCKCCCCCCAGCCGCG
GCCCCGCCCCCTCCC----
 A C G T A C G T A C G T A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCKCCCCCCAGCCGCG
GCCCCGCCCCC--------
 A C G T A C G T A C G T A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCKCCCCCCAGCCGCG-
--GGCCYCCTGCTGDGH
 A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCKCCCCCCAGCCGCG
----GGCCCCGCCCCC
 A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCKCCCCCCAGCCGCG
GGTCCCGCCCCCTTCTC---
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G T G A C T G A C A T G C G T A C A T G C A G T C C G T A A C T G A T G C A G T C A C T G A G T C A T C G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T