Information for 5-GCAGATTCAGGRA (Motif 11)

C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
Reverse Opposite:
A G C T A G C T A G T C A G T C C G A T A C T G T C G A C T G A C A G T A G T C A G C T C T A G G A T C
p-value:1e-16
log p-value:-3.876e+01
Information Content per bp:1.679
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.8 +/- 22.7bp
Average Position of motif in Background76.0 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCAGATTCAGGRA
TAGAANVTTCTAGAA
 A C G T A C G T C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAGATTCAGGRA---
--ACATTCATGACACG
 C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAGATTCAGGRA
-CGGTTTCAAA--
 C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAGATTCAGGRA
GAANNTTCTAGAA
 C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGATTCAGGRA--
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T A C G T C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCAGATTCAGGRA
GAACGTTCTAGAA
 C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCAGATTCAGGRA--
GACCACATTCATACAAT
 A C G T A C G T C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCAGATTCAGGRA
GAANGTTCTAGAA
 C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAGATTCAGGRA
-TGGTTTCAGT--
 C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAGATTCAGGRA
GCTGASTCAGCA-
 C T A G G A T C C T G A C T A G G T C A G A C T A G C T A G T C C G T A C T A G C T A G C T G A T C G A
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T