Information for 19-ACGCATACAAAAA (Motif 23)

C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G C T A C G T C T A G A C G T C G T A C A G T A C T G A G T C C T A G A C G T
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.920
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 16.4bp
Average Position of motif in Background62.7 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGCATACAAAAA-
CGAAGCACACAAAATA
 A C G T A C G T C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACGCATACAAAAA
ATTTGCATACAATGG
 A C G T A C G T C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ACGCATACAAAAA
AAAATATGCATAATAAA-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACGCATACAAAAA--
AGCCGAAAAAAAAAT
 C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACGCATACAAAAA-
BAGTCATANTGAAAG
 A C G T C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACGCATACAAAAA---
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACGCATACAAAAA---
-AACAAACAACAAGAG
 C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGCATACAAAAA-
AAAATGTAAACAAACAG
 A C G T A C G T A C G T C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGCATACAAAAA-
AAAATGTAAACAAACAG
 A C G T A C G T A C G T C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACGCATACAAAAA------
----GTATAAAAGGCGGGG
 C G T A A G T C A C T G A G T C G C T A A C G T C G T A A G T C C G T A C T G A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G