Information for 10-HCTBTCTGCATGA (Motif 13)

G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C G T C A A C G T A C T G A G T C G T C A C T A G C T G A T A C G C G T A A C T G C G T A
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 29.1bp
Average Position of motif in Background33.9 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:HCTBTCTGCATGA-----
--ACTATGAATGAATGAT
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:HCTBTCTGCATGA---
-CTTTCANTATGACTV
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.59
Offset:8
Orientation:forward strand
Alignment:HCTBTCTGCATGA-
--------CATGAC
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:HCTBTCTGCATGA
---ATTTGCATAA
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:HCTBTCTGCATGA----
NTTNTATGAATGTGNNC
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:HCTBTCTGCATGA-----
---ATTTGCATAACAAAG
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-HCTBTCTGCATGA----
NAGTTTCABTHTGACTNW
 A C G T G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:HCTBTCTGCATGA
TTCATTTGCATAT
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:HCTBTCTGCATGA--
-------NCGTGACN
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:HCTBTCTGCATGA----
AAAATATGCATAATAAA
 G A C T A G T C A C G T A G T C A G C T A G T C A C G T A C T G G T A C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A