Information for 4-STGGACAGCTCCCHSB (Motif 3)

T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
Reverse Opposite:
T G C A T A C G C T A G C T A G A C T G T C A G G C T A C T A G A G T C A C G T A C T G A C G T T G A C A G T C T G C A A T C G
p-value:1e-31
log p-value:-7.223e+01
Information Content per bp:1.663
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.77%
Number of Background Sequences with motif302.0
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets52.7 +/- 19.2bp
Average Position of motif in Background50.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:STGGACAGCTCCCHSB
---CACAGN-------
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:STGGACAGCTCCCHSB
---AGCAGCTGCTNN-
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------STGGACAGCTCCCHSB
TCAGCACCATGGACAGCTCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:STGGACAGCTCCCHSB
---GACAGCTGCAG--
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:STGGACAGCTCCCHSB
---AACAGCTGCAG--
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:STGGACAGCTCCCHSB
----NCAGCTGCTG--
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:STGGACAGCTCCCHSB
--NNACAGCTGC----
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:STGGACAGCTCCCHSB
NGNGACAGCTGCN---
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.63
Offset:-9
Orientation:forward strand
Alignment:---------STGGACAGCTCCCHSB
TTCAGCACCATGGACAGCGCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:STGGACAGCTCCCHSB
---AGCAGCTGCT---
 T A G C A C G T C T A G A C T G G T C A A G T C C G T A A C T G A G T C C G A T A G T C A G T C G A T C G A T C A T G C A C G T
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T