Information for 3-GCCCTGCTGTGAC (Motif 8)

A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
Reverse Opposite:
A C T G A C G T A T G C G T C A A G T C C G T A A C T G A G T C C G T A A C T G A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.924
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 20.9bp
Average Position of motif in Background34.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTGTGAC
CCCCCTGCTGTG--
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GCCCTGCTGTGAC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTGTGAC-
NNTCCTGCTGTGNNN
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCCCTGCTGTGAC
--CCTGCTGAGH-
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTGTGAC-
TNTCCTGCTGTGNNG
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTGTGAC-
TCNCCTGCTGNGNNN
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCCTGCTGTGAC
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCCTGCTGTGAC
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCCTGCTGTGAC
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCCTGCTGTGAC
--CCAGCTGTTN-
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C G T A T C G G T C A A G T C
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T