Information for 9-GTAAGGCCCC (Motif 20)

A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T A G A G T C A G T C A G C T A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.524e+01
Information Content per bp:1.946
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif23.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets23.3 +/- 23.1bp
Average Position of motif in Background57.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTAAGGCCCC--
--AAGACCCYYN
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAAGGCCCC
GGAAANCCCC
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGGCCCC-
GGGAAATCCCCN
 A C G T A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTAAGGCCCC
GGAAATCCCC
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTAAGGCCCC------
--CAGGCCNNGGCCNN
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTAAGGCCCC-
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAAGGCCCC
--AAGGTCAC
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTAAGGCCCC-
-CAAGGHCANV
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTAAGGCCCC-
---AGGCCTAG
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTAAGGCCCC-
---AGGCCTNG
 A C T G A C G T C G T A C T G A A C T G A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G