Information for 3-YCTCTSAGMGCST (Motif 5)

A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
Reverse Opposite:
C G T A A T G C A C T G A G T C A C T G A G T C A C G T A T C G T C G A A C T G C G T A A C T G C T A G
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.876
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.1 +/- 26.3bp
Average Position of motif in Background63.3 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:YCTCTSAGMGCST
SCTGTCARCACC-
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-YCTCTSAGMGCST
GCCGCGCAGTGCGT
 A C G T A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:YCTCTSAGMGCST
--CTTGAGTGGCT
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:YCTCTSAGMGCST
---TTGAGTGSTT
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:YCTCTSAGMGCST
---TTAAGTGCTT
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:YCTCTSAGMGCST
--DCTCAGCAGG-
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:YCTCTSAGMGCST
-GCCTCAGGGCAT
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---YCTCTSAGMGCST
TGACCTCTGACCCCN-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:YCTCTSAGMGCST
CCTTTTATAGNC-
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.46
Offset:5
Orientation:forward strand
Alignment:YCTCTSAGMGCST
-----CAGCC---
 A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G G T A C A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T