Information for 6-AGCCGCCATC (Motif 13)

T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C
Reverse Opposite:
A T C G T G C A G A C T T A C G C A T G T G A C T A C G T A C G T G A C A C G T
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.651
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif13.62%
Number of Background Sequences with motif3451.5
Percentage of Background Sequences with motif7.37%
Average Position of motif in Targets48.5 +/- 28.2bp
Average Position of motif in Background50.7 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AGCCGCCATC---
-GCCGCCATCTTG
 T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C A C G T A C G T A C G T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGCCGCCATC-
GTCCGCCATTA
 T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGCCGCCATC---
-GCNGCCATCTTG
 T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C A C G T A C G T A C G T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGCCGCCATC---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGCCGCCATC---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGCCATC
YAACBGCC---
 A C G T T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCCGCCATC----
----GCCATCTGTT
 T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCCGCCATC---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGCCGCCATC
CCAACTGCCA--
 A C G T A C G T T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCCGCCATC
--ACGTCATC
 T G C A A C T G A T G C A T G C A C T G G T A C A T G C C T G A A C G T T A G C
A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C