Information for 4-GSMMCWGGCYGGCKAG (Motif 7)

A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T G T A C A C T G A T G C A G T C C T G A A T C G A G T C A G T C G C T A A T C G A C T G A C G T A T C G A G T C
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.8 +/- 16.8bp
Average Position of motif in Background55.8 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GSMMCWGGCYGGCKAG
------GGCGCGCT--
 A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GSMMCWGGCYGGCKAG
CGCCTCAGGCA------
 A C G T A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GSMMCWGGCYGGCKAG
AGCCTCAGGCA------
 A C G T A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GSMMCWGGCYGGCKAG-----
----NAGANTGGCGGGGNGNA
 A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GSMMCWGGCYGGCKAG
AGCCTCAGGCA------
 A C G T A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GSMMCWGGCYGGCKAG
----CTGTCTGG----
 A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GSMMCWGGCYGGCKAG
AAGGKGRCGCAGGCA------
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GSMMCWGGCYGGCKAG
----TWGTCTGV----
 A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.48
Offset:8
Orientation:forward strand
Alignment:GSMMCWGGCYGGCKAG---
--------AAGGCAAGTGT
 A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---GSMMCWGGCYGGCKAG
NTNGCCTCAGGCNNN----
 A C G T A C G T A C G T A C T G A T G C T G C A G T A C A T G C C G A T A C T G A C T G A T G C A G C T A C T G A T C G A G T C A C T G C G T A C T A G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T