| p-value: | 1e-11 |
| log p-value: | -2.547e+01 |
| Information Content per bp: | 1.723 |
| Number of Target Sequences with motif | 8.0 |
| Percentage of Target Sequences with motif | 0.86% |
| Number of Background Sequences with motif | 8.1 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 40.1 +/- 17.5bp |
| Average Position of motif in Background | 50.3 +/- 20.9bp |
| Strand Bias (log2 ratio + to - strand density) | 2.8 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
| Match Rank: | 1 |
| Score: | 0.60
| | Offset: | 5
| | Orientation: | forward strand |
| Alignment: | RGGTGGGTWCCCTGCT----
-----GGCCYCCTGCTGDGH |
|
|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 2 |
| Score: | 0.59
| | Offset: | 7
| | Orientation: | reverse strand |
| Alignment: | RGGTGGGTWCCCTGCT---
-------CCCCCTGCTGTG |
|
|
|
NFKB2/MA0778.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | RGGTGGGTWCCCTGCT
AGGGGAATCCCCT--- |
|
|
|
NFKB1/MA0105.4/Jaspar
| Match Rank: | 4 |
| Score: | 0.56
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | RGGTGGGTWCCCTGCT
AGGGGATTCCCCT--- |
|
|
|
PB0156.1_Plagl1_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --RGGTGGGTWCCCTGCT
GCTGGGGGGTACCCCTT- |
|
|
|
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer
| Match Rank: | 6 |
| Score: | 0.54
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | RGGTGGGTWCCCTGCT
GGGGGAATCCCC---- |
|
|
|
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 7 |
| Score: | 0.54
| | Offset: | 7
| | Orientation: | reverse strand |
| Alignment: | RGGTGGGTWCCCTGCT-
-------TGCCCAGNHW |
|
|
|
PB0052.1_Plagl1_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.53
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -RGGTGGGTWCCCTGCT
TTGGGGGCGCCCCTAG- |
|
|
|
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
| Match Rank: | 9 |
| Score: | 0.52
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | RGGTGGGTWCCCTGCT
NGGGGATTTCCC---- |
|
|
|
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
| Match Rank: | 10 |
| Score: | 0.52
| | Offset: | 10
| | Orientation: | forward strand |
| Alignment: | RGGTGGGTWCCCTGCT----
----------CCTGCTGAGH |
|
|
|
