Information for 9-CTGCTCCGTG (Motif 18)

A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C T G A C T G C G T A A C T G A T G C C G T A C T A G
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.948
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif41.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets34.8 +/- 16.9bp
Average Position of motif in Background50.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CTGCTCCGTG
--GCTCCG--
 A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGCTCCGTG
CNGTCCTCCC--
 A C G T A C G T A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCTCCGTG-
-GGGTACGTGC
 A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTCCGTG-
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGCTCCGTG---
---TTGCGTGCVA
 A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTGCTCCGTG
----TGCGTG
 A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTCCGTG-
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTGCTCCGTG-
---GGACGTGC
 A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTGCTCCGTG-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGCTCCGTG--
----TACGTGCV
 A G T C A C G T A T C G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C