Motif 9

Information for 10-CCAGCTTCCGCCG (Motif 9)

Reverse Opposite:

p-value:	1e-11
log p-value:	-2.598e+01
Information Content per bp:	1.914
Number of Target Sequences with motif	6.0
Percentage of Target Sequences with motif	0.66%
Number of Background Sequences with motif	2.4
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	52.3 +/- 24.4bp
Average Position of motif in Background	68.3 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:	1
Score:	0.69
Offset:	0
Orientation:	forward strand
Alignment:	CCAGCTTCCGCCG--- CCGTCTTCCCCCTCAC

HINFP/MA0131.2/Jaspar

Match Rank:	2
Score:	0.62
Offset:	1
Orientation:	forward strand
Alignment:	CCAGCTTCCGCCG -CAACGTCCGCGG

Myod1/MA0499.1/Jaspar

Match Rank:	3
Score:	0.61
Offset:	-1
Orientation:	forward strand
Alignment:	-CCAGCTTCCGCCG TGCAGCTGTCCCT-

ETV6/MA0645.1/Jaspar

Match Rank:	4
Score:	0.59
Offset:	2
Orientation:	reverse strand
Alignment:	CCAGCTTCCGCCG --CACTTCCGCT-

ELK4/MA0076.2/Jaspar

Match Rank:	5
Score:	0.58
Offset:	1
Orientation:	forward strand
Alignment:	CCAGCTTCCGCCG -CCACTTCCGGC-

PB0150.1_Mybl1_2/Jaspar

Match Rank:	6
Score:	0.58
Offset:	-3
Orientation:	forward strand
Alignment:	---CCAGCTTCCGCCG CGACCAACTGCCGTG-

Myog/MA0500.1/Jaspar

Match Rank:	7
Score:	0.58
Offset:	-2
Orientation:	reverse strand
Alignment:	--CCAGCTTCCGCCG NNGCAGCTGTC----

Gabpa/MA0062.2/Jaspar

Match Rank:	8
Score:	0.57
Offset:	0
Orientation:	reverse strand
Alignment:	CCAGCTTCCGCCG NCCACTTCCGG--

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:	9
Score:	0.57
Offset:	2
Orientation:	forward strand
Alignment:	CCAGCTTCCGCCG --HACTTCCGGY-

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:	10
Score:	0.57
Offset:	3
Orientation:	reverse strand
Alignment:	CCAGCTTCCGCCG ---ACTTCCGGNT