Information for 5-TAAACCACAA (Motif 4)

C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A
Reverse Opposite:
A C G T C G A T C A T G C G A T C A T G C T A G A G C T A G C T C G A T G T C A
p-value:1e-18
log p-value:-4.160e+01
Information Content per bp:1.656
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.57%
Number of Background Sequences with motif959.9
Percentage of Background Sequences with motif2.03%
Average Position of motif in Targets48.0 +/- 26.1bp
Average Position of motif in Background51.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:forward strand
Alignment:TAAACCACAA-
-AAACCACANN
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TAAACCACAA
NAAACCACAG
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:TAAACCACAA--
-AAACCACAGAN
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TAAACCACAA--
NWAACCACADNN
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TAAACCACAA-
-AAACCGCAAA
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TAAACCACAA-
-AAACCACAGC
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.86
Offset:1
Orientation:forward strand
Alignment:TAAACCACAA
-AAACCGCAA
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAAACCACAA
TCCAATCCACA-
 A C G T A C G T C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAAACCACAA-
SSAATCCACANN
 A C G T C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TAAACCACAA
--ATCCAC--
 C A G T G C T A T C G A T C G A G A T C G T A C G C T A G T A C G C T A T G C A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T