Information for 11-CGYTCAGCTGGGG (Motif 19)

G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
Reverse Opposite:
T A G C A T G C A G T C G T A C C G T A C T A G A T G C A C G T A C T G G T C A T C G A A T G C A C T G
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.786
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.2 +/- 27.8bp
Average Position of motif in Background48.1 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CGYTCAGCTGGGG
---HCAGCTGDTN
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CGYTCAGCTGGGG
--CGCAGCTGCG-
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGYTCAGCTGGGG
--GACAGCTGCAG
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CGYTCAGCTGGGG
----CAGCTGNT-
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGYTCAGCTGGGG
---NCAGCTGCTG
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CGYTCAGCTGGGG
---GCAGCTGTNN
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CGYTCAGCTGGGG-
--NVCAGCTGBBNN
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGYTCAGCTGGGG
-NAACAGCTGG--
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CGYTCAGCTGGGG
---ACAGCTGTTN
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGYTCAGCTGGGG
--AACAGCTGCAG
 G T A C A T C G A G C T C A G T G T A C G T C A A T C G A G T C A C G T A C T G C T A G A T C G A T C G
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G