Information for 8-TGTCTTTATAGGT (Motif 13)

A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
Reverse Opposite:
G T C A G T A C A G T C C G A T C G T A C G A T C T G A C G T A C G T A A C T G C G T A G T A C C T G A
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.787
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.2 +/- 25.3bp
Average Position of motif in Background55.7 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTCTTTATAGGT
--TTTTTATTGG-
 A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGTCTTTATAGGT
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTCTTTATAGGT
--NTTTTATTGG-
 A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGTCTTTATAGGT
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGTCTTTATAGGT
---TTTTATKRGG
 A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCTTTATAGGT
TCTATTTTTAGA-
 A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCTTTATAGGT
TCTATTTATAGN-
 A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGTCTTTATAGGT-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTTTATAGGT--
NNAATTTTATTGGNTN
 A C G T A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTCTTTATAGGT
--NTTTTATTGG-
 A G C T A C T G C G A T G T A C C G A T C G A T A G C T C G T A A C G T C G T A C T A G A C T G A C G T
A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T