Information for 6-CATCTGCTAT (Motif 4)

A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
Reverse Opposite:
G T C A C A G T C G T A A C T G G T A C T G C A A T C G C T G A G C A T T C A G
p-value:1e-13
log p-value:-3.197e+01
Information Content per bp:1.704
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.21%
Number of Background Sequences with motif580.5
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets52.1 +/- 27.4bp
Average Position of motif in Background49.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTAT
ACCATCTGTT--
A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CATCTGCTAT
SNGCACCTGCHS-
A C G T A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTAT
GCCATCTGTT--
A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CATCTGCTAT--
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CATCTGCTAT
CAGCTGNT--
A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTAT
AGCAGCTGCT--
A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTAT
AACACCTGCT--
A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTAT
CGCACCTGCT--
A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTAT
NNCACCTGNN--
A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCTAT
NVCAGCTGBBNN
A C G T A C G T A G T C C G T A G A C T A T G C A C G T A C T G G T A C G C A T G T C A C A G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C