Information for 7-GTSSYTTTTGAMA (Motif 13)

A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C G T C A C G T A C G T A C G T A C T G A A T G C A T G C C T G A G T A C
p-value:1e-9
log p-value:-2.253e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.3 +/- 33.6bp
Average Position of motif in Background55.7 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:GTSSYTTTTGAMA---
------TTTGAAACCG
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GTSSYTTTTGAMA--
-------TTGACAGG
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GTSSYTTTTGAMA--
-------TTGACAGC
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTSSYTTTTGAMA-
-----ATTTGAATT
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GTSSYTTTTGAMA-
-------TTGACAG
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTSSYTTTTGAMA-------
----GTATTGACAGCTNNTT
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTSSYTTTTGAMA-------
----GTATTGACAGGTNNTT
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTSSYTTTTGAMA-------
----NTATTGACAGGTNNTN
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTSSYTTTTGAMA---
-ANATTTTTGCAANTN
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTSSYTTTTGAMA-------
----NTATTGACAGCTNNTT
 A C T G A G C T A T C G A T C G A G C T A C G T A C G T A C G T A C G T A C T G C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T