Information for 3-CTTAGGCTTT (Motif 5)

A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
Reverse Opposite:
G T C A C G T A C T G A A C T G A G T C A T G C A G C T T G C A C G T A C T A G
p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.856
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif77.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets56.1 +/- 27.5bp
Average Position of motif in Background49.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGGCTTT
TGCCTGAGGCN--
 A C G T A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGGCTTT
NGCCTNAGGCN--
 A C G T A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTTAGGCTTT
--CAAGCTT-
 A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGGCTTT--
TACTTCCGCTTTTT
 A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T A C G T A C G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTAGGCTTT
-CNAGGCCT-
 A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGGCTTT
NGCCTGAGGCN--
 A C G T A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTTAGGCTTT
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTTAGGCTTT
ATGCCCTGAGGC---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTTAGGCTTT
WTGSCCTSAGGS---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGGCTTT--
TACTTCCTCTTTTN
 A C G T A C G T A G T C A C G T A C G T C T G A A T C G C T A G A G T C A G C T A C G T A C G T A C G T A C G T
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T