Information for 10-GTCTGCTGCC (Motif 12)

T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
Reverse Opposite:
A C T G T C A G T A G C G C T A A T C G A G T C C G T A T A C G T G C A A T G C
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.656
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.39%
Number of Background Sequences with motif1259.7
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets50.5 +/- 25.9bp
Average Position of motif in Background50.5 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCTGCC
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTCTGCTGCC-----
GTCWGCTGTYYCTCT
 T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C A C G T A C G T A C G T A C G T A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTGCC
CTGTCTGG----
 A C G T A C G T T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTGCC
TWGTCTGV----
 A C G T A C G T T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCTGCTGCC
--CAGCTGNT
 T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCTGCTGCC
AATTTGCTGAC
 A C G T T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTCTGCTGCC---
---TGCTGACTCA
 T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGCTGCC
NNAGCAGCTGCT
 A C G T A C G T T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCTGCC
NNGCAGCTGTC
 A C G T T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTGCC
NNVVCAGCTGBN
 A C G T A C G T T A C G A C G T A T G C G C A T T C A G T A G C C G A T A T C G A G T C T G A C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T