Information for 17-ATGTTAATGC (Motif 27)

C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C G T
p-value:1e-2
log p-value:-5.154e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 27.8bp
Average Position of motif in Background56.0 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATGC-
TATGCWAATBAV
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATGC-
WATGCAAATGAG
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATGC
TATGCAAAT--
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAATGC
TATGCAAAT--
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATGTTAATGC
TTATGCAAATTA
 A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGTTAATGC
TTATGCAAATTA
 A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAATGC
AATATGCAAATT-
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGTTAATGC
--GKTAATGR
 C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGTTAATGC-
ATATTAATTAA
 C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATGTTAATGC------
NTTGTTAATCCCTCTNN
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A