Information for 5-TGAGATTCCTTTG (Motif 6)

C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G
Reverse Opposite:
T A G C G T C A C T G A C G T A A C T G C T A G G C T A C G T A G A C T A G T C C G A T G T A C C G T A
p-value:1e-12
log p-value:-2.935e+01
Information Content per bp:1.786
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.3 +/- 24.4bp
Average Position of motif in Background49.1 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGAGATTCCTTTG
-----TTCCTCT-
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGAGATTCCTTTG-------
----ANTCCTTTGTCTNNNN
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGAGATTCCTTTG-------
---NNTTCCTTTGATCTNNA
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGAGATTCCTTTG
--GCATTCCAGN-
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAGATTCCTTTG
-CACATTCCAT--
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGAGATTCCTTTG-
--AGGVNCCTTTGT
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G A C G T
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAGATTCCTTTG
--RCATTCCWGG-
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGAGATTCCTTTG--
TACGAGACTCCTCTAAC
 A C G T A C G T C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGAGATTCCTTTG-------
---NNTTCCTTTGATCTANA
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGAGATTCCTTTG
---ACTTCCTGTT
 C G A T A C T G C G T A C T A G C G T A A C G T C A G T A G T C A G T C A C G T A G C T A C G T A C T G
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T