Information for 10-GCAGGTGAAT (Motif 19)

A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
Reverse Opposite:
G T C A C G A T A C G T A G T C C G T A A G T C G T A C A G C T A T C G A G T C
p-value:1e-5
log p-value:-1.355e+01
Information Content per bp:1.830
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif75.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets51.8 +/- 22.6bp
Average Position of motif in Background50.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCAGGTGAAT
VCAGGTRDRY
 A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGAAT
NNCAGGTGNN-
 A C G T A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGAAT
SDGCAGGTGCNS
 A C G T A C G T A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTGAAT
AACAGGTGT--
 A C G T A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCAGGTGAAT
-CAGGTGAGG
 A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAGGTGAAT--
-CAGGTAAGTAT
 A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGAAT
GACAGGTGTN-
 A C G T A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGAAT
NNCAGGTGTN-
 A C G T A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGAAT
NNCAGGTGCG-
 A C G T A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCAGGTGAAT
GCACGTGA--
 A C T G A T G C T C G A C A T G C T A G C G A T C T A G C G T A G C T A A C G T
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T