Information for 15-AMGGCTTGCCCTG (Motif 18)

T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G
Reverse Opposite:
A G T C C G T A C A T G A C T G A C T G G T A C C G T A C T G A A T C G A G T C A G T C A C G T A G C T
p-value:1e-7
log p-value:-1.686e+01
Information Content per bp:1.782
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.1 +/- 27.3bp
Average Position of motif in Background42.0 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:AMGGCTTGCCCTG---
------TGCCCAGNHW
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AMGGCTTGCCCTG-
-----CTGCCCGCA
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AMGGCTTGCCCTG
-NNACTTGCCTT-
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AMGGCTTGCCCTG----
-----ATGCCCTGAGGC
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AMGGCTTGCCCTG
GGGGCCGAGGCCTG
 A C G T T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AMGGCTTGCCCTG----
---ACATGCCCGGGCAT
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AMGGCTTGCCCTG-
------TGACCTYA
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AMGGCTTGCCCTG----
---NGTTGCCATGGCAA
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.55
Offset:9
Orientation:forward strand
Alignment:AMGGCTTGCCCTG--
---------GCTGTG
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AMGGCTTGCCCTG--
---ACTTTCACTTTC
 T C G A G T C A C T A G T A C G A T G C A G C T C G A T A C T G A G T C A G T C G A T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C