Information for 13-GACRCGYTYTCCT (Motif 16)

A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G A C T G C G T A T C A G C G T A C T A G G T A C A C T G G A C T A C T G A C G T A G T C
p-value:1e-8
log p-value:-1.954e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 19.4bp
Average Position of motif in Background74.6 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GACRCGYTYTCCT
NAGNACANNNTGTNCT
 A C G T A C G T A C G T A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACRCGYTYTCCT-
GRACAGWMTGTYCTB
 A C G T A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GACRCGYTYTCCT-
AGNACAGNCTGTTCTN
 A C G T A C G T A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GACRCGYTYTCCT---
------ATTTCCTGTN
 A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GACRCGYTYTCCT---
----NNAYTTCCTGHN
 A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GACRCGYTYTCCT-
GVACAGNMTGTYCTB
 A C G T A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GACRCGYTYTCCT
------TTTTCCA
 A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

PAX5/MA0014.2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GACRCGYTYTCCT------
GTCACGCTTGGCTGCNCNN
 A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GACRCGYTYTCCT
AGGNCANNGTGACCT
 A C G T A C G T A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GACRCGYTYTCCT-
GGTCANNGTGACCTN
 A C G T A C T G C G T A A G T C C T A G A G T C A C T G A G T C A C G T A G T C A C G T A G T C A T G C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T