Information for 7-CTAAATTAGA (Motif 15)

A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
Reverse Opposite:
A C G T A T G C A C G T C T G A C G T A C G A T A C G T A C G T C G T A C T A G
p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.850
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif30.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.5 +/- 24.0bp
Average Position of motif in Background55.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SHOX/MA0630.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTAAATTAGA
-NCAATTAN-
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
A C G T A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A A C G T

UNCX/MA0721.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTAAATTAGA
-CTAATTAA-
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
A C G T A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A A C G T

ALX3/MA0634.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTAAATTAGA
TCTAATTAAA
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

mix-a/MA0621.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTAAATTAGA
AATTAATTAGT
 A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

MIXL1/MA0662.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAAATTAGA
TCTAATTAAC
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
C G A T A G T C G A C T T C G A G C T A A G C T A G C T G C T A T C G A T G A C

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAAATTAGA
GCTAATTAGC
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

PAX4/MA0068.2/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTAAATTAGA
-CTAATTAG-
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
A C G T A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G A C G T

LHX2/MA0700.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTAAATTAGA
NNTAATTAGN
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T

VSX2/MA0726.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTAAATTAGA
-NTAATTAG-
 A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A
A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

PH0175.1_Vax2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTAAATTAGA----
GNCTTAATTAGTGNNN
 A C G T A C G T A G T C A C G T C G T A G T C A C G T A A C G T A G C T G T C A A T C G C G T A A C G T A C G T A C G T A C G T
A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C