Information for 2-AGAGGCGAAA (Motif 7)

C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A G T C T C A G A G T C G T A C A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.604e+01
Information Content per bp:1.854
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif45.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.5 +/- 24.1bp
Average Position of motif in Background49.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGAGGCGAAA--
AGAAACGAAAGT
 C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCGAAA---
GAGAACCGAAACTG
 A C G T C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCGAAA-
CGGAAGTGAAAC
 A C G T C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCGAAA----
ARGAGGMCAAAATGW
 A C G T C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCGAAA----
CAAAATCGAAACTAA
 A C G T C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGGCGAAA--
GRAASTGAAAST
 C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGGCGAAA--
GGAAGTGAAAST
 C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGGCGAAA-----
CGTATCGAAACCAAA
 C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCGAAA----
ATAAACCGAAACCAA
 A C G T C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAGGCGAAA--
GAAAMTGAAACT
 C G T A A C T G C G T A A C T G T A C G A G T C C T A G T G C A C T G A C G T A A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T