Information for 9-RTTTCATATTTGA (Motif 15)

C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
Reverse Opposite:
A C G T A G T C C T G A C G T A C T G A A G C T G T C A C G A T A C T G C G T A C G T A C T G A A G C T
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.718
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.0 +/- 30.6bp
Average Position of motif in Background54.0 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---RTTTCATATTTGA
NNTTTTTCTTATNT--
 A C G T A C G T A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RTTTCATATTTGA
TGGTTTCAGT-----
 A C G T A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-RTTTCATATTTGA
AGTTTCAKTTTC--
 A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RTTTCATATTTGA
ACTTTCACTTTC--
 A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RTTTCATATTTGA
ANTTTCGCTTTCGN
 A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RTTTCATATTTGA
AGTTTCAGTTTC--
 A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RTTTCATATTTGA
ASTTTCASTTYC--
 A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RTTTCATATTTGA
AGTTTCGGTTTCGN
 A C G T C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RTTTCATATTTGA
GTTTCACTTCCG-
 C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RTTTCATATTTGA---
-TATCATAATTAAGGA
 C T G A A G C T A C G T A C G T G T A C C G T A C A G T C T G A G A C T G C A T A G C T C T A G C G T A A C G T A C G T A C G T
A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A