Information for 1-ARVAAGMCAAKTT (Motif 1)

T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T
Reverse Opposite:
C G T A C T G A G T C A A C G T A C G T C T A G A C G T A G T C A C G T A C G T A G T C A G T C A G C T
p-value:1e-14
log p-value:-3.273e+01
Information Content per bp:1.684
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif62.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets63.6 +/- 21.0bp
Average Position of motif in Background48.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ARVAAGMCAAKTT
-AAAAGTCAA---
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ARVAAGMCAAKTT-
---AAGGCAAGTGT
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ARVAAGMCAAKTT-
AGGGAAGTCATTTCT
 A C G T T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ARVAAGMCAAKTT
AGAAACGAAAGT-
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ARVAAGMCAAKTT
AAGATAAGATAACA-
 A C G T A C G T T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ARVAAGMCAAKTT
-NGAAGC------
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ARVAAGMCAAKTT----
-AAAAACCAATTAAGAA
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0007.1_Barx1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ARVAAGMCAAKTT------
---AAAGTAATTAGTGAAT
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ARVAAGMCAAKTT-
NNCNNAACAATTNT
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PH0005.1_Barhl1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ARVAAGMCAAKTT----
-AACAACCAATTAATTC
 T C G A C T A G T C A G C G T A C G T A C T A G T G C A G A T C G T C A G T C A C A G T G A C T C G A T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C