Information for 11-AGCATATATG (Motif 35)

C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
Reverse Opposite:
G T A C G T C A A G C T C G T A C A G T T C G A A C G T A C T G T A G C C G A T
p-value:1e-4
log p-value:-9.343e+00
Information Content per bp:1.720
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.08%
Number of Background Sequences with motif936.2
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets53.2 +/- 29.0bp
Average Position of motif in Background50.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGCATATATG----
TGACCATATATGGTCA
 A C G T A C G T C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGCATATATG
-CCATATGT-
 C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCATATATG
ANCATATGGT
 C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCATATATG-
NAACATATGTTT
 A C G T C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G A C G T
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGCATATATG
ACCATATGTT
 C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCATATATG
ANCATATGTT
 C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

OLIG1/MA0826.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCATATATG
AACATATGTT
 C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCATATATG
ANCATATGGT
 C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGCATATATG----
ANNNGGATATATCCNNN
 A C G T A C G T A C G T C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCATATATG
ACCATATGGT
 C G T A A T C G A G T C G T C A A G C T G T C A A C G T T C G A C A G T C A T G
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T