Information for 7-CTCTCATTGA (Motif 30)

A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A
Reverse Opposite:
A G C T G T A C C G T A C T G A C G A T T C A G G T C A C T A G C T G A A C T G
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.787
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif360.4
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets55.2 +/- 28.1bp
Average Position of motif in Background50.3 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCATTGA-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

RARA::RXRA/MA0159.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCATTGA---
TGACCTCTCNNTGACCT
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T A C G T A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCTCATTGA
GSCTGTCACTCA
 A C G T A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTCATTGA---
BTGACCTCTNNHTGACCY
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCTCATTGA---
-TNCCTTTGATGT
 A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T A C G T A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCTCATTGA-----
-TNCCTTTGATCTTN
 A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCTCATTGA-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTCATTGA-
ACTTTCACTTTC
 A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCTCATTGA----
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCATTGA----
GCTGACCTTGAACTN
 A C G T A G T C A G C T A G T C A C G T A G T C G C T A A G C T A C G T A C T G C T G A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T