Information for 2-TTTGCAGATAACHTGT (Motif 2)

A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
Reverse Opposite:
C T G A A T G C C G T A C A T G C T A G A C G T C G A T C G T A C G A T A G T C C G A T A C T G G T A C C G T A C G T A G T C A
p-value:1e-15
log p-value:-3.526e+01
Information Content per bp:1.732
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 11.7bp
Average Position of motif in Background70.1 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCAGATAACHTGT
ATTTGCATAT-------
 A C G T A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTTGCAGATAACHTGT----
---GANGTTAACTAGTTTNN
 A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTTGCAGATAACHTGT---
--AGCTGTTAACTAGCCGT
 A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TTTGCAGATAACHTGT
NTNTTCTTATCAGTNTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTTGCAGATAACHTGT
---GCTGTTACCCT--
 A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTTGCAGATAACHTGT
ATTTGCATAA-------
 A C G T A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTTGCAGATAACHTGT
-----AGATAASR---
 A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TTTGCAGATAACHTGT
TTCATTTGCATAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTTGCAGATAACHTGT
TTMACACCTT------
 A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTTGCAGATAACHTGT
AGTTTCAGTTTC-----
 A C G T A C G T A C G T C G A T A C T G A G T C C G T A C T A G C G T A A C G T C G T A G T C A A G T C G A T C C G A T A T C G A G C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T