Information for 5-GCCCDGCTTGCAG (Motif 11)

A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
Reverse Opposite:
G T A C A G C T A T C G A T G C G T C A C T G A A T C G A T G C G C T A C T A G A C T G A T C G A G T C
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.756
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif47.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.6 +/- 26.6bp
Average Position of motif in Background49.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCDGCTTGCAG
TGCCCTGAGGGCA-
 A C G T A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCDGCTTGCAG
TGCCCTGAGGGCA-
 A C G T A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCDGCTTGCAG
TGCCCTGAGGGCA-
 A C G T A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCCDGCTTGCAG
TGGCAGNCTGCCAG
 A C G T A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCDGCTTGCAG
TGCCCAGNHW----
 A C G T A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCCCDGCTTGCAG--
DCHCAGCAGGRGGCC
 A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCCCDGCTTGCAG
-----CTTGGCAA
 A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCCCDGCTTGCAG
----GGTTGGCAT
 A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCCDGCTTGCAG-------
---NNNANTGCAGTGCNNTT
 A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GCCCDGCTTGCAG-
--------NGAAGC
 A C T G A T G C G T A C G A T C C G A T A T C G A T G C A G C T A C G T A T C G T A G C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C