Information for 7-CTGACCACARWVTHHA (Motif 5)

A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
Reverse Opposite:
C G A T C A G T C T A G G T C A A G T C C G A T G A T C C G A T A C T G C A G T A C T G C T A G C A G T G T A C C T G A A C T G
p-value:1e-11
log p-value:-2.675e+01
Information Content per bp:1.656
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif72.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.1 +/- 22.9bp
Average Position of motif in Background52.6 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTGACCACARWVTHHA
NWAACCACADNN----
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTGACCACARWVTHHA
NAAACCACAG------
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGACCACARWVTHHA
-AAACCACAGC-----
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGACCACARWVTHHA
-AAACCACAGAN----
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGACCACARWVTHHA
-AAACCACANN-----
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGACCACARWVTHHA
-TGACCYCT-------
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGACCACARWVTHHA
-AAACCGCAAA-----
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGACCACARWVTHHA
NNNNTTGACCCCTNNNN---
 A C G T A C G T A C G T A C G T A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGACCACARWVTHHA
TGTCGTGACCCCTTAAT---
 A C G T A C G T A C G T A C G T A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGACCACARWVTHHA
-TGACCTYA-------
 A G T C A G C T C A T G G C T A A G T C A G T C G T C A A G T C C G T A C T A G G C T A T C A G C A G T G A C T G T C A G C T A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T