Information for 8-GAKCCGGGCTCCG (Motif 8)

A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
Reverse Opposite:
A T G C C T A G A C T G C G T A A T C G A T G C A T G C A T G C A C T G A C T G T G A C C A G T A G T C
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.764
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif68.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets43.7 +/- 29.1bp
Average Position of motif in Background51.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:7
Orientation:forward strand
Alignment:GAKCCGGGCTCCG
-------GCTCCG
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAKCCGGGCTCCG------
---CCGTCTTCCCCCTCAC
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAKCCGGGCTCCG
-GGCCCCGCCCCC
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAKCCGGGCTCCG
---CNGTCCTCCC
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAKCCGGGCTCCG
ATAATCCC-------
 A C G T A C G T A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAKCCGGGCTCCG---
GAGCCCTTGTCCCTAA
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAKCCGGGCTCCG
GCTCCGCCCMCY-
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GAKCCGGGCTCCG
NNNNTGACCCGGCGCG--
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAKCCGGGCTCCG---
-TGCCTGCGYCMCCTT
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G A C G T A C G T A C G T
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GAKCCGGGCTCCG
--GCCCCGCCCC-
 A C T G G T C A A C T G A G T C A G T C A T C G A T C G A T C G A T G C A C G T A G T C A G T C A T C G
A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T