Information for 8-CAGCYCTCCCTGRAWG (Motif 6)

A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
Reverse Opposite:
A G T C C G T A A G C T G A C T A T G C C G T A C T A G C A T G A C T G C G T A A C T G C T A G A T C G A G T C A C G T A T C G
p-value:1e-11
log p-value:-2.750e+01
Information Content per bp:1.693
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.2 +/- 25.3bp
Average Position of motif in Background50.8 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCYCTCCCTGRAWG
CNAGGCCT---------
 A C G T A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAGCYCTCCCTGRAWG
CGAACAGTGCTCACTAT---
 A C G T A C G T A C G T A C G T A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGCYCTCCCTGRAWG
CTAGGCCT---------
 A C G T A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGCYCTCCCTGRAWG
NNAATTCTCGNTNAN--
 A C G T A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGCYCTCCCTGRAWG
CNGTCCTCCC------
 A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CAGCYCTCCCTGRAWG
CAGCC-----------
 A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:7
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CAGCYCTCCCTGRAWG-
-AGACCCCCCACGAAGC
 A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G A C G T
A C G T G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CAGCYCTCCCTGRAWG-
---NNCTTCCNGGAAGN
 A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G A C G T
A C G T A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CAGCYCTCCCTGRAWG
CAGGCCNNGGCCNN--
 A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CAGCYCTCCCTGRAWG-
-----TTTCCNGGAAAN
 A T G C C G T A C T A G A T G C G A T C A G T C C G A T G T A C G T A C A G T C C G A T A T C G C T G A C T G A C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C